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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10172272 chr2:235570391 C/T AAMP chr2:219128846-219134980:- 0.63 6.03 3.89E-9 Box Plot
BLCA rs10174776 chr2:230634114 C/T AGFG1 chr2:228336868-228425930:+ -0.67 -6.07 3.14E-9 Box Plot
BLCA rs10174776 chr2:230634114 C/T CAPN10 chr2:241526133-241557122:+ -0.71 -6.25 1.08E-9 Box Plot
BLCA rs10174776 chr2:230634114 C/T COPS7B chr2:232646381-232673964:+ -0.9 -6.12 2.27E-9 Box Plot
BLCA rs10174776 chr2:230634114 C/T CUL3 chr2:225334867-225450114:- -0.94 -6.73 6.32E-11 Box Plot
BLCA rs10174776 chr2:230634114 C/T ING5 chr2:242626500-242668893:+ -0.71 -6.16 1.87E-9 Box Plot
BLCA rs10174776 chr2:230634114 C/T LRRFIP1 chr2:238536219-238722325:+ -0.79 -6.65 1.03E-10 Box Plot
BLCA rs10174776 chr2:230634114 C/T MYEOV2 chr2:241065980-241076224:- -0.73 -6.77 4.71E-11 Box Plot
BLCA rs10174776 chr2:230634114 C/T NCL chr2:232318242-232348352:- -0.68 -6.82 3.67E-11 Box Plot
BLCA rs10174776 chr2:230634114 C/T PTMA chr2:232571605-232578251:+ -0.93 -6.59 1.48E-10 Box Plot
BLCA rs10174776 chr2:230634114 C/T UBE2F chr2:238875469-238951423:+ -0.72 -6.73 6.16E-11 Box Plot
BLCA rs10174776 chr2:230634114 C/T XRCC5 chr2:216972187-217071026:+ -0.82 -6.15 2.0E-9 Box Plot
BLCA rs10178528 chr2:194993169 A/G CASP8 chr2:202098166-202152434:+ 0.83 6.95 1.61E-11 Box Plot
BLCA rs10178528 chr2:194993169 A/G SF3B1 chr2:198254508-198299815:- 0.75 7.22 2.74E-12 Box Plot
BLCA rs10190845 chr2:112950521 A/C C19orf30 chr19:4769117-4772567:+ -0.45 -5.96 5.86E-9 Box Plot